Schools / Workshop 2022

Virtual mini-symposium on QM/MM

Implementation and algorithms for QM/MM simulations — talks given by postdocs and graduate students.

Focus
Implementation and algorithms for QM/MM simulations.
When
November 5, 2022
8:45 AM to 3:00 PM (Eastern US)
Format
Virtual mini-symposium

Participating groups

  • Oliviero Andreussi (Boise State University)
  • Marco Caricato (University of Kansas)
  • Andrés Cisneros (UT Dallas)
  • William Glover (NYU, Shanghai)
  • John Herbert (Ohio State University)
  • Francesco Paesani (UC San Diego)
  • Michele Pavanello (Rutgers University-Newark)
  • Alexander Sokolov (Ohio State University)
  • Lyudmila Slipchenko (Purdue University)

Organizing committee

Program

Opening

9:00Opening Remarks

Morning session

Discussion session 1

TimeActivityModerator
11:00Breakout rooms for discussion & lunchOliviero Andreussi, Alexander Sokolov

Afternoon session

TimeSpeakerGroupTitle
12:30Xuecheng ShaoPavanello, RutgersA Density-Functionalization of QM/MM
1:00Jorge NochebuenaCisneros, UT DallasQM/MM Simulations with the Gaussian Electrostatic Model
1:30Saswata DasguptaPaesani, UCSDData-Driven Many-Body Potentials from Density Functional Theory and a Many-Body Approach to QM/MM Simulations

Discussion session 2

TimeActivityModerator
2:00Breakout rooms for discussion & coffeeMarco Caricato, Andres Cisneros

Closing

2:45Closing remarks

Speakers

Dustin Broderick

Dustin Broderick

Saswata Dasgupta

Saswata Dasgupta

Saswata Dasgupta obtained his PhD from Ohio State University. His field of expertise includes DFT method development and many-body QM/MM methods.

Alexander Humeniuk

Alexander Humeniuk

Alexander Humeniuk obtained his PhD at the University of Würzburg / Freie Universität Berlin. He develops electronic structure methods for ground and excited states. His field of expertise includes non-adiabatic and semiclassical molecular dynamics, simulation of ultrafast time-resolved spectroscopy experiments, and prediction of photophysical properties of small molecules.

Jorge Nochebuena

Jorge Nochebuena

Jorge Nochebuena obtained his PhD from the Universidad Autónoma Metropolitana-Iztapalapa, Mexico. He is currently developing QM/MM methods that use polarizable force fields.

Amiel Paz

Amiel Paz

Amiel Paz is a graduate student of New York University in Shanghai. His expertise is in electronic structure methods for scalable and stable non-adiabatic ab initio excited-state molecular dynamics for photochemistry in the condensed phase.

Xuecheng Shao

Xuecheng Shao

Xuecheng Shao obtained his PhD from Jilin University in China. He is an active developer of multi-scale modeling software in Python such as DFTpy, eDFTpy, and QEpy. His field of expertise includes orbital-free DFT, density embedding / subsystem DFT and now also QM/MM.

Andres Urbina

Andres Urbina

Andres Urbina obtained his PhD from Purdue University. He is working on protein-ligand interactions — specifically, exploring GPCR-ligand interactions using the effective fragment potential (EFP) method.